Usage:
abi-dump [options] [ -A ]
abi-dump [options]
-A, --accession Accession.
Options:
-D, --table-path Path to accession data.
-O, --outdir Output directory. Default: '.'
-N, --minSpotId Minimum spot id to output.
-X, --maxSpotId Maximum spot id to output.
-G, --spot-group Split into files by SPOT_GROUP (member name).
-GL, --spot-group-list [name,[name...]] Filter by SPOT_GROUP (member).
-R, --read-filter [pass|reject|criteria|redacted] Split into files by READ_FILTER value, optional filter by a value.
-T, --group-in-dirs Split into subdirectories instead of files.
-K, --keep-empty-files Do not delete empty files.
-L, --log-level Logging level: fatal|sys|int|err|warn|info.
-H, --help Prints this message.
Format options:
-M, --minReadLen Minimum read length to output. Default: 25
-W, --noclip Do not clip quality left and right for spot.
-F, --origfmt Excludes SRR accession on defline.
-B, --noDotReads Do not output reads consisting mostly of dots.
Version: 2.0.4